Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04946 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04946 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
P04946 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.3■□□□□ 0.04
P04946 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04946 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
P04946 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.29■□□□□ 0.04
P04946 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.29■□□□□ 0.04
P04946 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.29■□□□□ 0.04
P04946 Gm30025-201ENSMUST00000218555 728 ntBASIC15.29■□□□□ 0.04
P04946 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04946 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.28■□□□□ 0.04
P04946 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Gm13401-201ENSMUST00000117074 291 ntBASIC15.28■□□□□ 0.04
P04946 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
P04946 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.28■□□□□ 0.04
P04946 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04946 Fst-202ENSMUST00000223640 2612 ntBASIC15.28■□□□□ 0.04
P04946 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
P04946 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.27■□□□□ 0.04
P04946 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
P04946 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.27■□□□□ 0.04
P04946 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
P04946 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.27■□□□□ 0.04
P04946 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.27■□□□□ 0.04
P04946 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04946 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04946 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04946 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04946 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
P04946 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04946 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04946 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04946 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.27■□□□□ 0.03
P04946 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
P04946 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
P04946 Gm12085-201ENSMUST00000119263 940 ntBASIC15.26■□□□□ 0.03
P04946 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Gm43799-201ENSMUST00000201845 579 ntBASIC15.26■□□□□ 0.03
P04946 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04946 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.25■□□□□ 0.03
P04946 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04946 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04946 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P04946 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04946 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04946 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04946 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04946 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.25■□□□□ 0.03
P04946 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04946 Gm6433-201ENSMUST00000118634 875 ntBASIC15.25■□□□□ 0.03
P04946 Gm13836-201ENSMUST00000121159 501 ntBASIC15.25■□□□□ 0.03
P04946 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04946 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms