Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H3f3cP02301 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Dio3-201ENSMUST00000097228 1449 ntBASIC15.29■□□□□ 0.04
H3f3cP02301 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.29■□□□□ 0.04
H3f3cP02301 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H3f3cP02301 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Flg-201ENSMUST00000050758 1488 ntBASIC15.28■□□□□ 0.04
H3f3cP02301 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H3f3cP02301 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
H3f3cP02301 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.27■□□□□ 0.04
H3f3cP02301 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
H3f3cP02301 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
H3f3cP02301 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
H3f3cP02301 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.27■□□□□ 0.04
H3f3cP02301 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Gm12527-201ENSMUST00000117967 564 ntBASIC15.27■□□□□ 0.04
H3f3cP02301 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.27■□□□□ 0.04
H3f3cP02301 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.27■□□□□ 0.04
H3f3cP02301 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H3f3cP02301 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H3f3cP02301 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
H3f3cP02301 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3f3cP02301 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3f3cP02301 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3f3cP02301 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H3f3cP02301 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3f3cP02301 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3f3cP02301 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H3f3cP02301 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.26■□□□□ 0.03
H3f3cP02301 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.26■□□□□ 0.03
H3f3cP02301 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.26■□□□□ 0.03
H3f3cP02301 Gm38285-201ENSMUST00000192928 922 ntBASIC15.26■□□□□ 0.03
H3f3cP02301 Zfp783-201ENSMUST00000095946 670 ntBASIC15.26■□□□□ 0.03
H3f3cP02301 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H3f3cP02301 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.25■□□□□ 0.03
H3f3cP02301 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
H3f3cP02301 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.25■□□□□ 0.03
H3f3cP02301 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 Gm12896-201ENSMUST00000118430 226 ntBASIC15.25■□□□□ 0.03
H3f3cP02301 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.25■□□□□ 0.03
H3f3cP02301 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.25■□□□□ 0.03
H3f3cP02301 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
H3f3cP02301 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3f3cP02301 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms