Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01643 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01643 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01643 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P01643 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P01643 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.15□□□□□ -0.14
P01643 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Gm11643-201ENSMUST00000119578 864 ntBASIC14.15□□□□□ -0.14
P01643 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
P01643 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P01643 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.14□□□□□ -0.15
P01643 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P01643 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
P01643 Gm6433-201ENSMUST00000118634 875 ntBASIC14.14□□□□□ -0.15
P01643 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Gm3375-201ENSMUST00000203929 796 ntBASIC14.14□□□□□ -0.15
P01643 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P01643 Tgds-204ENSMUST00000228543 1594 ntBASIC14.13□□□□□ -0.15
P01643 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.13□□□□□ -0.15
P01643 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
P01643 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
P01643 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Gm10517-202ENSMUST00000192970 758 ntBASIC14.13□□□□□ -0.15
P01643 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
P01643 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
P01643 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
P01643 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.13□□□□□ -0.15
P01643 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P01643 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
P01643 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
P01643 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
P01643 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.12□□□□□ -0.15
P01643 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.12□□□□□ -0.15
P01643 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
P01643 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.12□□□□□ -0.15
P01643 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
P01643 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P01643 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
P01643 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.11□□□□□ -0.15
P01643 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.11□□□□□ -0.15
P01643 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.11□□□□□ -0.15
P01643 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
P01643 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P01643 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01643 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P01643 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P01643 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P01643 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P01643 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01643 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms