Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Best1O88870 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.15■□□□□ 0.34
Best1O88870 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Best1O88870 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Best1O88870 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Best1O88870 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Best1O88870 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Best1O88870 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Best1O88870 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Best1O88870 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Best1O88870 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.14■□□□□ 0.33
Best1O88870 Gm38027-201ENSMUST00000192315 235 ntBASIC17.14■□□□□ 0.33
Best1O88870 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Best1O88870 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Best1O88870 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.14■□□□□ 0.33
Best1O88870 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Best1O88870 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Best1O88870 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Best1O88870 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Best1O88870 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Best1O88870 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
Best1O88870 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.12■□□□□ 0.33
Best1O88870 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Best1O88870 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.12■□□□□ 0.33
Best1O88870 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Best1O88870 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Best1O88870 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.11■□□□□ 0.33
Best1O88870 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Best1O88870 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Gm6433-201ENSMUST00000118634 875 ntBASIC17.11■□□□□ 0.33
Best1O88870 Gm12085-201ENSMUST00000119263 940 ntBASIC17.11■□□□□ 0.33
Best1O88870 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Best1O88870 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.11■□□□□ 0.33
Best1O88870 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.11■□□□□ 0.33
Best1O88870 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.11■□□□□ 0.33
Best1O88870 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Best1O88870 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Best1O88870 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Gm24841-201ENSMUST00000158676 357 ntBASIC17.1■□□□□ 0.33
Best1O88870 Gm43799-201ENSMUST00000201845 579 ntBASIC17.1■□□□□ 0.33
Best1O88870 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Best1O88870 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Best1O88870 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.1■□□□□ 0.33
Best1O88870 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Best1O88870 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Best1O88870 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms