Protein–RNA interactions for Protein: O55033

Nck2, Cytoplasmic protein NCK2, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck2O55033 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nck2O55033 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nck2O55033 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nck2O55033 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nck2O55033 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nck2O55033 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nck2O55033 Gm6345-202ENSMUST00000180900 204 ntBASIC20.41■□□□□ 0.86
Nck2O55033 Gm27463-201ENSMUST00000183569 57 ntBASIC20.41■□□□□ 0.86
Nck2O55033 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.41■□□□□ 0.86
Nck2O55033 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nck2O55033 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nck2O55033 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.41■□□□□ 0.86
Nck2O55033 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nck2O55033 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nck2O55033 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nck2O55033 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nck2O55033 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.4■□□□□ 0.86
Nck2O55033 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Nck2O55033 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.4■□□□□ 0.86
Nck2O55033 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nck2O55033 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nck2O55033 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nck2O55033 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nck2O55033 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nck2O55033 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nck2O55033 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Nck2O55033 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nck2O55033 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nck2O55033 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nck2O55033 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nck2O55033 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.38■□□□□ 0.85
Nck2O55033 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nck2O55033 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.38■□□□□ 0.85
Nck2O55033 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.38■□□□□ 0.85
Nck2O55033 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nck2O55033 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nck2O55033 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nck2O55033 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nck2O55033 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nck2O55033 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nck2O55033 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nck2O55033 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nck2O55033 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nck2O55033 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.37■□□□□ 0.85
Nck2O55033 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.37■□□□□ 0.85
Nck2O55033 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nck2O55033 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nck2O55033 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.37■□□□□ 0.85
Nck2O55033 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.36■□□□□ 0.85
Nck2O55033 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.36■□□□□ 0.85
Nck2O55033 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nck2O55033 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.36■□□□□ 0.85
Nck2O55033 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck2O55033 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nck2O55033 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck2O55033 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck2O55033 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.35■□□□□ 0.85
Nck2O55033 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nck2O55033 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nck2O55033 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck2O55033 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck2O55033 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.35■□□□□ 0.85
Nck2O55033 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.35■□□□□ 0.85
Nck2O55033 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck2O55033 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Nck2O55033 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck2O55033 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck2O55033 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms