Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cntnap1O54991 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC23.18■■□□□ 1.3
Cntnap1O54991 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cntnap1O54991 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cntnap1O54991 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cntnap1O54991 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cntnap1O54991 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC23.17■■□□□ 1.3
Cntnap1O54991 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Cntnap1O54991 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC23.17■■□□□ 1.3
Cntnap1O54991 CT943659.1-201ENSMUST00000215459 326 ntBASIC23.17■■□□□ 1.3
Cntnap1O54991 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Cntnap1O54991 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Cntnap1O54991 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cntnap1O54991 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cntnap1O54991 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cntnap1O54991 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cntnap1O54991 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cntnap1O54991 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cntnap1O54991 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cntnap1O54991 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC23.16■■□□□ 1.3
Cntnap1O54991 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC23.16■■□□□ 1.3
Cntnap1O54991 Gm12350-201ENSMUST00000121208 462 ntBASIC23.16■■□□□ 1.3
Cntnap1O54991 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cntnap1O54991 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cntnap1O54991 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cntnap1O54991 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Cntnap1O54991 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cntnap1O54991 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cntnap1O54991 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Cntnap1O54991 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC23.15■■□□□ 1.3
Cntnap1O54991 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cntnap1O54991 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cntnap1O54991 Gm1818-201ENSMUST00000169406 1184 ntBASIC23.15■■□□□ 1.3
Cntnap1O54991 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cntnap1O54991 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Cntnap1O54991 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cntnap1O54991 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cntnap1O54991 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cntnap1O54991 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cntnap1O54991 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC23.14■■□□□ 1.3
Cntnap1O54991 Gm7862-201ENSMUST00000121461 292 ntBASIC23.14■■□□□ 1.3
Cntnap1O54991 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cntnap1O54991 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cntnap1O54991 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Cntnap1O54991 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Cntnap1O54991 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cntnap1O54991 Gm8784-201ENSMUST00000222096 1435 ntBASIC23.14■■□□□ 1.29
Cntnap1O54991 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Cntnap1O54991 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Cntnap1O54991 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC23.14■■□□□ 1.29
Cntnap1O54991 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC23.14■■□□□ 1.29
Cntnap1O54991 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cntnap1O54991 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC23.13■■□□□ 1.29
Cntnap1O54991 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cntnap1O54991 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC23.13■■□□□ 1.29
Cntnap1O54991 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Cntnap1O54991 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Cntnap1O54991 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cntnap1O54991 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC23.12■■□□□ 1.29
Cntnap1O54991 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cntnap1O54991 Gm38345-201ENSMUST00000192635 1748 ntBASIC23.12■■□□□ 1.29
Cntnap1O54991 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cntnap1O54991 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Cntnap1O54991 Gm37820-201ENSMUST00000194021 2147 ntBASIC23.12■■□□□ 1.29
Cntnap1O54991 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
Cntnap1O54991 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cntnap1O54991 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cntnap1O54991 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cntnap1O54991 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cntnap1O54991 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cntnap1O54991 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cntnap1O54991 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cntnap1O54991 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cntnap1O54991 Gm7935-201ENSMUST00000100555 1278 ntBASIC23.11■■□□□ 1.29
Cntnap1O54991 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC23.11■■□□□ 1.29
Cntnap1O54991 Gm2756-201ENSMUST00000195851 400 ntBASIC23.11■■□□□ 1.29
Cntnap1O54991 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cntnap1O54991 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Cntnap1O54991 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cntnap1O54991 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Cntnap1O54991 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Cntnap1O54991 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cntnap1O54991 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC23.1■■□□□ 1.29
Cntnap1O54991 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cntnap1O54991 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC23.1■■□□□ 1.29
Cntnap1O54991 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cntnap1O54991 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cntnap1O54991 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cntnap1O54991 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cntnap1O54991 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cntnap1O54991 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cntnap1O54991 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms