Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Smarce1O54941 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Smarce1O54941 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Smarce1O54941 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Smarce1O54941 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarce1O54941 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarce1O54941 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarce1O54941 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarce1O54941 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarce1O54941 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarce1O54941 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.18■□□□□ 0.98
Smarce1O54941 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarce1O54941 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Smarce1O54941 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarce1O54941 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarce1O54941 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.17■□□□□ 0.98
Smarce1O54941 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Smarce1O54941 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarce1O54941 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Idnk-204ENSMUST00000226010 1898 ntBASIC21.16■□□□□ 0.98
Smarce1O54941 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.16■□□□□ 0.98
Smarce1O54941 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.16■□□□□ 0.98
Smarce1O54941 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.16■□□□□ 0.98
Smarce1O54941 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarce1O54941 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.16■□□□□ 0.98
Smarce1O54941 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.16■□□□□ 0.98
Smarce1O54941 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarce1O54941 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarce1O54941 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarce1O54941 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Smarce1O54941 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarce1O54941 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarce1O54941 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.15■□□□□ 0.98
Smarce1O54941 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.15■□□□□ 0.98
Smarce1O54941 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smarce1O54941 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarce1O54941 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarce1O54941 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarce1O54941 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarce1O54941 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.14■□□□□ 0.98
Smarce1O54941 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
Smarce1O54941 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarce1O54941 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.14■□□□□ 0.98
Smarce1O54941 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smarce1O54941 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarce1O54941 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.14■□□□□ 0.97
Smarce1O54941 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.14■□□□□ 0.97
Smarce1O54941 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarce1O54941 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.14■□□□□ 0.97
Smarce1O54941 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarce1O54941 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarce1O54941 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarce1O54941 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarce1O54941 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarce1O54941 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarce1O54941 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.13■□□□□ 0.97
Smarce1O54941 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smarce1O54941 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.13■□□□□ 0.97
Smarce1O54941 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smarce1O54941 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarce1O54941 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarce1O54941 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms