Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Limk2O54785 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.08■□□□□ 0.49
Limk2O54785 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Limk2O54785 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Limk2O54785 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.08■□□□□ 0.48
Limk2O54785 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Limk2O54785 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.08■□□□□ 0.48
Limk2O54785 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Limk2O54785 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Limk2O54785 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Limk2O54785 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Limk2O54785 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Limk2O54785 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Limk2O54785 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Limk2O54785 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Mtag2-201ENSMUST00000058665 714 ntBASIC18.07■□□□□ 0.48
Limk2O54785 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk2O54785 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.06■□□□□ 0.48
Limk2O54785 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.06■□□□□ 0.48
Limk2O54785 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.06■□□□□ 0.48
Limk2O54785 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.06■□□□□ 0.48
Limk2O54785 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.06■□□□□ 0.48
Limk2O54785 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Limk2O54785 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk2O54785 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Mir1199-201ENSMUST00000117015 119 ntBASIC18.05■□□□□ 0.48
Limk2O54785 Gm13158-201ENSMUST00000122007 736 ntBASIC18.05■□□□□ 0.48
Limk2O54785 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Limk2O54785 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.05■□□□□ 0.48
Limk2O54785 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk2O54785 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Limk2O54785 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.04■□□□□ 0.48
Limk2O54785 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Limk2O54785 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.04■□□□□ 0.48
Limk2O54785 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Limk2O54785 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.04■□□□□ 0.48
Limk2O54785 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.04■□□□□ 0.48
Limk2O54785 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Gm37055-201ENSMUST00000191866 133 ntBASIC18.04■□□□□ 0.48
Limk2O54785 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.04■□□□□ 0.48
Limk2O54785 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.04■□□□□ 0.48
Limk2O54785 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk2O54785 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Limk2O54785 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk2O54785 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.03■□□□□ 0.48
Limk2O54785 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk2O54785 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Limk2O54785 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.03■□□□□ 0.48
Limk2O54785 Gm15565-201ENSMUST00000118890 427 ntBASIC18.03■□□□□ 0.48
Limk2O54785 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Limk2O54785 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.03■□□□□ 0.48
Limk2O54785 Mir2861-201ENSMUST00000175539 82 ntBASIC18.03■□□□□ 0.48
Limk2O54785 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.03■□□□□ 0.48
Limk2O54785 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.03■□□□□ 0.48
Limk2O54785 Gm10138-203ENSMUST00000206952 366 ntBASIC18.03■□□□□ 0.48
Limk2O54785 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk2O54785 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk2O54785 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Limk2O54785 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk2O54785 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Limk2O54785 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Limk2O54785 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Limk2O54785 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms