Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccr6O54689 Gm13216-201ENSMUST00000117145 591 ntBASIC14.98□□□□□ -0.01
Ccr6O54689 Golgb1-201ENSMUST00000023534 498 ntBASIC14.98□□□□□ -0.01
Ccr6O54689 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccr6O54689 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccr6O54689 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.98□□□□□ -0.01
Ccr6O54689 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccr6O54689 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccr6O54689 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccr6O54689 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccr6O54689 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccr6O54689 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccr6O54689 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccr6O54689 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccr6O54689 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccr6O54689 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccr6O54689 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccr6O54689 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccr6O54689 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccr6O54689 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ccr6O54689 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccr6O54689 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccr6O54689 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccr6O54689 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Ccr6O54689 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ccr6O54689 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ccr6O54689 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ccr6O54689 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ccr6O54689 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccr6O54689 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccr6O54689 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccr6O54689 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.94□□□□□ -0.02
Ccr6O54689 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.94□□□□□ -0.02
Ccr6O54689 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccr6O54689 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccr6O54689 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Ccr6O54689 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccr6O54689 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccr6O54689 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccr6O54689 Gm11421-201ENSMUST00000122124 294 ntBASIC14.93□□□□□ -0.02
Ccr6O54689 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms