Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nr1i3O35627 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Nr1i3O35627 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.15■□□□□ 0.66
Nr1i3O35627 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nr1i3O35627 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1i3O35627 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1i3O35627 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1i3O35627 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1i3O35627 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.14■□□□□ 0.65
Nr1i3O35627 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Gm10418-201ENSMUST00000100943 576 ntBASIC19.14■□□□□ 0.65
Nr1i3O35627 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.14■□□□□ 0.65
Nr1i3O35627 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Nr1i3O35627 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.14■□□□□ 0.65
Nr1i3O35627 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1i3O35627 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nr1i3O35627 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1i3O35627 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1i3O35627 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1i3O35627 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.13■□□□□ 0.65
Nr1i3O35627 Gm29791-202ENSMUST00000207888 369 ntBASIC19.13■□□□□ 0.65
Nr1i3O35627 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1i3O35627 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1i3O35627 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1i3O35627 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Nr1i3O35627 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1i3O35627 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1i3O35627 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nr1i3O35627 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.12■□□□□ 0.65
Nr1i3O35627 Flg-201ENSMUST00000050758 1488 ntBASIC19.12■□□□□ 0.65
Nr1i3O35627 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Gm26524-201ENSMUST00000192339 390 ntBASIC19.12■□□□□ 0.65
Nr1i3O35627 Gm42569-201ENSMUST00000200539 472 ntBASIC19.12■□□□□ 0.65
Nr1i3O35627 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.12■□□□□ 0.65
Nr1i3O35627 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nr1i3O35627 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nr1i3O35627 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Nr1i3O35627 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Nr1i3O35627 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nr1i3O35627 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Nr1i3O35627 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Gm8495-201ENSMUST00000188740 694 ntBASIC19.11■□□□□ 0.65
Nr1i3O35627 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nr1i3O35627 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.11■□□□□ 0.65
Nr1i3O35627 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nr1i3O35627 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nr1i3O35627 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nr1i3O35627 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nr1i3O35627 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms