Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
Clk2O35491 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.4■□□□□ 0.7
Clk2O35491 Gm43799-201ENSMUST00000201845 579 ntBASIC19.4■□□□□ 0.7
Clk2O35491 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk2O35491 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clk2O35491 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk2O35491 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.4■□□□□ 0.7
Clk2O35491 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk2O35491 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk2O35491 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clk2O35491 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk2O35491 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clk2O35491 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.39■□□□□ 0.7
Clk2O35491 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clk2O35491 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clk2O35491 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clk2O35491 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clk2O35491 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Clk2O35491 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.39■□□□□ 0.69
Clk2O35491 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Clk2O35491 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.39■□□□□ 0.69
Clk2O35491 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Clk2O35491 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 Gm29791-202ENSMUST00000207888 369 ntBASIC19.39■□□□□ 0.69
Clk2O35491 Gm4974-201ENSMUST00000209974 875 ntBASIC19.39■□□□□ 0.69
Clk2O35491 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.39■□□□□ 0.69
Clk2O35491 Gm30025-201ENSMUST00000218555 728 ntBASIC19.39■□□□□ 0.69
Clk2O35491 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Clk2O35491 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Clk2O35491 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Clk2O35491 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Clk2O35491 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.39■□□□□ 0.69
Clk2O35491 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clk2O35491 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.38■□□□□ 0.69
Clk2O35491 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.38■□□□□ 0.69
Clk2O35491 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.38■□□□□ 0.69
Clk2O35491 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clk2O35491 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Clk2O35491 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.37■□□□□ 0.69
Clk2O35491 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.37■□□□□ 0.69
Clk2O35491 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.37■□□□□ 0.69
Clk2O35491 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.37■□□□□ 0.69
Clk2O35491 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.37■□□□□ 0.69
Clk2O35491 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clk2O35491 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clk2O35491 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk2O35491 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk2O35491 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk2O35491 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk2O35491 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clk2O35491 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clk2O35491 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clk2O35491 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clk2O35491 Gm12085-201ENSMUST00000119263 940 ntBASIC19.36■□□□□ 0.69
Clk2O35491 Gm13836-201ENSMUST00000121159 501 ntBASIC19.36■□□□□ 0.69
Clk2O35491 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clk2O35491 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.36■□□□□ 0.69
Clk2O35491 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clk2O35491 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clk2O35491 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk2O35491 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.36■□□□□ 0.69
Clk2O35491 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk2O35491 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clk2O35491 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clk2O35491 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Clk2O35491 Gm6433-201ENSMUST00000118634 875 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms