Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf11bO08712 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf11bO08712 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf11bO08712 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf11bO08712 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf11bO08712 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf11bO08712 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf11bO08712 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf11bO08712 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.08■□□□□ 0.49
Tnfrsf11bO08712 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfrsf11bO08712 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfrsf11bO08712 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Gm2399-201ENSMUST00000104944 225 ntBASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Gm8495-201ENSMUST00000188740 694 ntBASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfrsf11bO08712 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Gm38285-201ENSMUST00000192928 922 ntBASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.06■□□□□ 0.48
Tnfrsf11bO08712 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms