Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3yl1O08641 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.97■□□□□ 0.31
Sh3yl1O08641 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3yl1O08641 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sh3yl1O08641 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3yl1O08641 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3yl1O08641 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3yl1O08641 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3yl1O08641 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Gm2559-201ENSMUST00000201323 363 ntBASIC16.95■□□□□ 0.3
Sh3yl1O08641 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.95■□□□□ 0.3
Sh3yl1O08641 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.95■□□□□ 0.3
Sh3yl1O08641 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3yl1O08641 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Trmt13-210ENSMUST00000198454 880 ntBASIC16.94■□□□□ 0.3
Sh3yl1O08641 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3yl1O08641 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3yl1O08641 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.94■□□□□ 0.3
Sh3yl1O08641 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.93■□□□□ 0.3
Sh3yl1O08641 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.93■□□□□ 0.3
Sh3yl1O08641 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3yl1O08641 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.92■□□□□ 0.3
Sh3yl1O08641 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.92■□□□□ 0.3
Sh3yl1O08641 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3yl1O08641 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Gm20760-201ENSMUST00000179197 648 ntBASIC16.91■□□□□ 0.3
Sh3yl1O08641 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3yl1O08641 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3yl1O08641 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3yl1O08641 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3yl1O08641 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3yl1O08641 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh3yl1O08641 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms