Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc188F6WEU2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ccdc188F6WEU2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc188F6WEU2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc188F6WEU2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc188F6WEU2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc188F6WEU2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ccdc188F6WEU2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc188F6WEU2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc188F6WEU2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc188F6WEU2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc188F6WEU2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc188F6WEU2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Rps4l-201ENSMUST00000071745 943 ntBASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc188F6WEU2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc188F6WEU2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms