Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Gm29791-202ENSMUST00000207888 369 ntBASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.99■□□□□ 0.95
Pcdhb9E9Q5G2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb9E9Q5G2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb9E9Q5G2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Mir5122-201ENSMUST00000175004 89 ntBASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb9E9Q5G2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Gm10517-202ENSMUST00000192970 758 ntBASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb9E9Q5G2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Grk6-206ENSMUST00000224995 2971 ntBASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb9E9Q5G2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms