Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Gm5913-201ENSMUST00000119397 1399 ntBASIC10.09□□□□□ -0.79
Herc1E9PZP8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Gm14140-201ENSMUST00000119999 995 ntBASIC10.09□□□□□ -0.79
Herc1E9PZP8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.09□□□□□ -0.79
Herc1E9PZP8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.09□□□□□ -0.79
Herc1E9PZP8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC10.09□□□□□ -0.79
Herc1E9PZP8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Herc1E9PZP8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Gm37722-201ENSMUST00000193757 208 ntBASIC10.08□□□□□ -0.8
Herc1E9PZP8 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.08□□□□□ -0.8
Herc1E9PZP8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.08□□□□□ -0.8
Herc1E9PZP8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Herc1E9PZP8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.07□□□□□ -0.8
Herc1E9PZP8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Herc1E9PZP8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Mir2861-201ENSMUST00000175539 82 ntBASIC10.06□□□□□ -0.8
Herc1E9PZP8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Gm15372-201ENSMUST00000120729 834 ntBASIC10.06□□□□□ -0.8
Herc1E9PZP8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Gm8396-201ENSMUST00000057361 823 ntBASIC10.06□□□□□ -0.8
Herc1E9PZP8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC10.06□□□□□ -0.8
Herc1E9PZP8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.06□□□□□ -0.8
Herc1E9PZP8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Herc1E9PZP8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Herc1E9PZP8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms