Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Hfm1D3Z4R1 Gm26039-201ENSMUST00000158152 144 ntBASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Gm34391-201ENSMUST00000203706 907 ntBASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC25.12■■□□□ 1.61
Hfm1D3Z4R1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Hfm1D3Z4R1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Hfm1D3Z4R1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Hfm1D3Z4R1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC25.11■■□□□ 1.61
Hfm1D3Z4R1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Hfm1D3Z4R1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
Hfm1D3Z4R1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC25.11■■□□□ 1.61
Hfm1D3Z4R1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Hfm1D3Z4R1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 Tgds-204ENSMUST00000228543 1594 ntBASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Hfm1D3Z4R1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Hfm1D3Z4R1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Hfm1D3Z4R1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Hfm1D3Z4R1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC25.09■■□□□ 1.61
Hfm1D3Z4R1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Hfm1D3Z4R1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Hfm1D3Z4R1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Hfm1D3Z4R1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Gm37722-201ENSMUST00000193757 208 ntBASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Mzt1-203ENSMUST00000227948 952 ntBASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Hfm1D3Z4R1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Hfm1D3Z4R1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Hfm1D3Z4R1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
Hfm1D3Z4R1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC25.08■■□□□ 1.6
Hfm1D3Z4R1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 Actl10-202ENSMUST00000226583 1501 ntBASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hfm1D3Z4R1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Mir770-201ENSMUST00000103252 94 ntBASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hfm1D3Z4R1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Hfm1D3Z4R1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Hfm1D3Z4R1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms