Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.18■□□□□ 0.66
Ptchd4B9EKX1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Gm18959-201ENSMUST00000208954 655 ntBASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptchd4B9EKX1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptchd4B9EKX1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ptchd4B9EKX1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.15■□□□□ 0.66
Ptchd4B9EKX1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptchd4B9EKX1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptchd4B9EKX1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptchd4B9EKX1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ptchd4B9EKX1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Gm6659-201ENSMUST00000174752 547 ntBASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Gm45058-201ENSMUST00000205810 766 ntBASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Gm29791-202ENSMUST00000207888 369 ntBASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.14■□□□□ 0.65
Ptchd4B9EKX1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Ptchd4B9EKX1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ptchd4B9EKX1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptchd4B9EKX1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Gm24841-201ENSMUST00000158676 357 ntBASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptchd4B9EKX1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms