Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Gm29791-202ENSMUST00000207888 369 ntBASIC18.75■□□□□ 0.59
Scn1aA2APX8 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.75■□□□□ 0.59
Scn1aA2APX8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1aA2APX8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Scn1aA2APX8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1aA2APX8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Scn1aA2APX8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1aA2APX8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1aA2APX8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1aA2APX8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.73■□□□□ 0.59
Scn1aA2APX8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1aA2APX8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1aA2APX8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.73■□□□□ 0.59
Scn1aA2APX8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1aA2APX8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Scn1aA2APX8 Odf3b-204ENSMUST00000227834 930 ntBASIC18.73■□□□□ 0.59
Scn1aA2APX8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1aA2APX8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Scn1aA2APX8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Scn1aA2APX8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1aA2APX8 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.7■□□□□ 0.58
Scn1aA2APX8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1aA2APX8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1aA2APX8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1aA2APX8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.7■□□□□ 0.58
Scn1aA2APX8 Gm4974-201ENSMUST00000209974 875 ntBASIC18.7■□□□□ 0.58
Scn1aA2APX8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1aA2APX8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1aA2APX8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn1aA2APX8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1aA2APX8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1aA2APX8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms