Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC28.34■■■□□ 2.13
Shroom2A2ALU4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Gm9731-201ENSMUST00000209480 747 ntBASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom2A2ALU4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Shroom2A2ALU4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Shroom2A2ALU4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Shroom2A2ALU4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Shroom2A2ALU4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Shroom2A2ALU4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC28.32■■■□□ 2.12
Shroom2A2ALU4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Shroom2A2ALU4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Shroom2A2ALU4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Shroom2A2ALU4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC28.31■■■□□ 2.12
Shroom2A2ALU4 Gm4995-201ENSMUST00000117247 432 ntBASIC28.31■■■□□ 2.12
Shroom2A2ALU4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Shroom2A2ALU4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Shroom2A2ALU4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Shroom2A2ALU4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Shroom2A2ALU4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Shroom2A2ALU4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Shroom2A2ALU4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Shroom2A2ALU4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Shroom2A2ALU4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Shroom2A2ALU4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Actl10-202ENSMUST00000226583 1501 ntBASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Shroom2A2ALU4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC28.27■■■□□ 2.12
Shroom2A2ALU4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Gm15467-201ENSMUST00000120582 445 ntBASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 AC124603.1-201ENSMUST00000223843 308 ntBASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom2A2ALU4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
Shroom2A2ALU4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Shroom2A2ALU4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Shroom2A2ALU4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Shroom2A2ALU4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Shroom2A2ALU4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Shroom2A2ALU4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms