Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.98■□□□□ 0.15
Trbv20A0A0B4J1H5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv20A0A0B4J1H5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv20A0A0B4J1H5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv20A0A0B4J1H5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv20A0A0B4J1H5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv20A0A0B4J1H5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv20A0A0B4J1H5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv20A0A0B4J1H5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trbv20A0A0B4J1H5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms