Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm10849-201ENSMUST00000100397 618 ntBASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm26571-201ENSMUST00000181399 666 ntBASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv19A0A0B4J1H4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm8969-201ENSMUST00000199694 526 ntBASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm42569-201ENSMUST00000200539 472 ntBASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv19A0A0B4J1H4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm7290-201ENSMUST00000104990 617 ntBASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm12918-201ENSMUST00000120234 636 ntBASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm15710-201ENSMUST00000121821 636 ntBASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm5075-201ENSMUST00000196916 622 ntBASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm7291-201ENSMUST00000199147 382 ntBASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv19A0A0B4J1H4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv19A0A0B4J1H4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trbv19A0A0B4J1H4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.27□□□□□ -0.12
Trbv19A0A0B4J1H4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv19A0A0B4J1H4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv19A0A0B4J1H4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv19A0A0B4J1H4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv19A0A0B4J1H4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv19A0A0B4J1H4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv19A0A0B4J1H4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv19A0A0B4J1H4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms