Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ighv1-42A0A0A6YY38 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ighv1-42A0A0A6YY38 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ighv1-42A0A0A6YY38 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm29791-202ENSMUST00000207888 369 ntBASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-42A0A0A6YY38 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm18959-201ENSMUST00000208954 655 ntBASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-42A0A0A6YY38 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Gm13401-201ENSMUST00000117074 291 ntBASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-42A0A0A6YY38 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms