Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm28557A0A087WQQ0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Gm22325-201ENSMUST00000158904 308 ntBASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.04■□□□□ 0.16
Gm28557A0A087WQQ0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28557A0A087WQQ0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28557A0A087WQQ0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.02■□□□□ 0.16
Gm28557A0A087WQQ0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28557A0A087WQQ0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Gm28557A0A087WQQ0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm28557A0A087WQQ0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm28557A0A087WQQ0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Gm28557A0A087WQQ0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm28557A0A087WQQ0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm28557A0A087WQQ0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm28557A0A087WQQ0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm28557A0A087WQQ0 Gm13234-201ENSMUST00000120010 747 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms