Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm43017-201ENSMUST00000198296 752 ntBASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm6139-201ENSMUST00000079261 882 ntBASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm45417-201ENSMUST00000209533 758 ntBASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm9988-201ENSMUST00000069786 435 ntBASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms