Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Dio3-201ENSMUST00000097228 1449 ntBASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Fst-202ENSMUST00000223640 2612 ntBASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Gm11927-201ENSMUST00000118472 759 ntBASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Gm20049-201ENSMUST00000219950 730 ntBASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-4A0A075B6B4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-4A0A075B6B4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav6-4A0A075B6B4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-4A0A075B6B4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav6-4A0A075B6B4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-4A0A075B6B4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-4A0A075B6B4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-4A0A075B6B4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-4A0A075B6B4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-4A0A075B6B4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-4A0A075B6B4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-4A0A075B6B4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms