Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav18A0A075B656 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav18A0A075B656 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav18A0A075B656 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav18A0A075B656 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav18A0A075B656 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav18A0A075B656 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav18A0A075B656 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav18A0A075B656 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Gm42642-201ENSMUST00000200683 355 ntBASIC14.58□□□□□ -0.08
Trav18A0A075B656 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav18A0A075B656 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Gm5874-201ENSMUST00000096101 508 ntBASIC14.57□□□□□ -0.08
Trav18A0A075B656 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav18A0A075B656 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.57□□□□□ -0.08
Trav18A0A075B656 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav18A0A075B656 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms