Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16nA0A075B634 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Gm38205-201ENSMUST00000192243 258 ntBASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16nA0A075B634 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Mir7075-201ENSMUST00000184187 82 ntBASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav16nA0A075B634 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16nA0A075B634 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms