Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trav9-1A0A075B601 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-1A0A075B601 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-1A0A075B601 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav9-1A0A075B601 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-1A0A075B601 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Gm22325-201ENSMUST00000158904 308 ntBASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-1A0A075B601 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 AV356131-201ENSMUST00000206201 750 ntBASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav9-1A0A075B601 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9-1A0A075B601 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9-1A0A075B601 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms