Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav1A0A075B5Z4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Gm29791-202ENSMUST00000207888 369 ntBASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav1A0A075B5Z4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav1A0A075B5Z4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Gm10418-201ENSMUST00000100943 576 ntBASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.54■□□□□ 0.24
Trav1A0A075B5Z4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Gm12933-201ENSMUST00000120203 872 ntBASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Mir2861-201ENSMUST00000175539 82 ntBASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Mir8112-201ENSMUST00000184382 131 ntBASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav1A0A075B5Z4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav1A0A075B5Z4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav1A0A075B5Z4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav1A0A075B5Z4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav1A0A075B5Z4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms