Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm18397-201ENSMUST00000176704 587 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm18006-201ENSMUST00000177411 662 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm37533-201ENSMUST00000193848 545 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm31211-201ENSMUST00000199170 253 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm43772-201ENSMUST00000202052 379 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm5885-202ENSMUST00000203357 528 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm18689-201ENSMUST00000203969 902 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 AC113305.1-201ENSMUST00000214664 724 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm9088-201ENSMUST00000220237 508 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.35□□□□□ -1.39
Ddx56Q9D0R4 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm12813-201ENSMUST00000119615 902 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm14989-201ENSMUST00000120497 207 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm11759-201ENSMUST00000121742 464 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Mup-ps4-201ENSMUST00000151005 539 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm25713-201ENSMUST00000158625 109 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm8009-201ENSMUST00000191672 436 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm44395-201ENSMUST00000197056 153 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm43368-201ENSMUST00000200638 409 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm43762-201ENSMUST00000201521 295 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm7570-201ENSMUST00000215246 698 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm18405-201ENSMUST00000220743 511 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 AC158392.1-201ENSMUST00000223720 1069 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm26176-201ENSMUST00000083795 105 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Defa-ps18-201ENSMUST00000098889 371 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms