Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Use1Q9CQ56 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.15□□□□□ -1.58
Use1Q9CQ56 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Use1Q9CQ56 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Use1Q9CQ56 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Use1Q9CQ56 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.15□□□□□ -1.58
Use1Q9CQ56 Gm22231-201ENSMUST00000101027 73 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm11908-201ENSMUST00000117755 347 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm13771-201ENSMUST00000117988 238 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm11774-201ENSMUST00000118601 293 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm16200-201ENSMUST00000120385 331 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Mir6412-201ENSMUST00000184477 97 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm18553-201ENSMUST00000194152 634 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm2429-201ENSMUST00000194635 586 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm43392-201ENSMUST00000196560 434 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm43973-201ENSMUST00000203562 210 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm44768-201ENSMUST00000205719 393 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm45789-201ENSMUST00000213038 364 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.15□□□□□ -1.59
Use1Q9CQ56 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Use1Q9CQ56 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm25117-201ENSMUST00000157194 144 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm9597-201ENSMUST00000171913 602 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm27679-201ENSMUST00000184612 84 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Mir6516-201ENSMUST00000196236 110 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm42983-201ENSMUST00000199879 815 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm4874-201ENSMUST00000203589 691 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm44214-201ENSMUST00000204153 606 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm5418-201ENSMUST00000206932 528 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Mir375-201ENSMUST00000083682 64 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.14□□□□□ -1.59
Use1Q9CQ56 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Use1Q9CQ56 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.13□□□□□ -1.59
Use1Q9CQ56 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.13□□□□□ -1.59
Use1Q9CQ56 Gm13428-201ENSMUST00000117540 365 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms