Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm17137-202ENSMUST00000165729 957 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm8032-201ENSMUST00000171009 574 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm3715-201ENSMUST00000172308 617 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm20530-201ENSMUST00000174261 254 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Mir6398-201ENSMUST00000184541 102 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm5734-201ENSMUST00000189787 913 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm44137-201ENSMUST00000203670 367 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm18467-201ENSMUST00000208805 434 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm45870-201ENSMUST00000211269 601 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm7990-201ENSMUST00000212126 593 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 AC122901.2-201ENSMUST00000216926 285 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm18592-201ENSMUST00000221529 276 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cstf3Q99LI7 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm14885-201ENSMUST00000117969 496 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm11349-201ENSMUST00000122209 1116 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm37430-201ENSMUST00000193039 196 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm43148-201ENSMUST00000198237 520 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm4928-201ENSMUST00000219622 850 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm6068-201ENSMUST00000222270 387 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cstf3Q99LI7 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Cstf3Q99LI7 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
Cstf3Q99LI7 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cstf3Q99LI7 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.46□□□□□ -1.54
Cstf3Q99LI7 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cstf3Q99LI7 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Cstf3Q99LI7 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cstf3Q99LI7 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.46□□□□□ -1.54
Cstf3Q99LI7 Mir546-201ENSMUST00000102105 121 ntBASIC5.46□□□□□ -1.54
Cstf3Q99LI7 Gm25917-201ENSMUST00000104267 130 ntBASIC5.46□□□□□ -1.54
Cstf3Q99LI7 Gm22374-201ENSMUST00000104583 132 ntBASIC5.46□□□□□ -1.54
Cstf3Q99LI7 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms