Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC5.81□□□□□ -1.48
Clrn1Q8K445 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 Gm45965-201ENSMUST00000221192 1284 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 Gm18026-201ENSMUST00000222789 727 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 CT025603.4-201ENSMUST00000225777 413 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.81□□□□□ -1.48
Clrn1Q8K445 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clrn1Q8K445 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm13469-201ENSMUST00000118231 350 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm12734-201ENSMUST00000120228 948 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm12399-201ENSMUST00000121475 446 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm23954-201ENSMUST00000157213 353 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm29111-201ENSMUST00000188823 696 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm28584-201ENSMUST00000191489 696 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm37265-201ENSMUST00000191698 885 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm38138-201ENSMUST00000193274 696 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm44374-201ENSMUST00000199821 140 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm43228-201ENSMUST00000200735 264 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm44118-201ENSMUST00000204665 229 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm44984-201ENSMUST00000207802 394 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 AC153541.1-201ENSMUST00000213786 294 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 AC161426.1-201ENSMUST00000214137 286 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 AC069561.2-201ENSMUST00000217596 420 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm22300-201ENSMUST00000082661 126 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm25403-201ENSMUST00000082971 143 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.8□□□□□ -1.48
Clrn1Q8K445 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clrn1Q8K445 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms