Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trub1Q8C0D0 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm13579-201ENSMUST00000118519 517 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm11825-201ENSMUST00000120710 736 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Mir1970-201ENSMUST00000157839 104 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm25660-201ENSMUST00000158470 104 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm3076-201ENSMUST00000161613 451 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm18969-201ENSMUST00000189423 730 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm19124-201ENSMUST00000191041 832 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm8719-201ENSMUST00000203602 534 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm10540-201ENSMUST00000097581 276 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.5□□□□□ -1.53
Trub1Q8C0D0 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm22266-201ENSMUST00000104011 138 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm23593-201ENSMUST00000104309 120 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm14985-201ENSMUST00000118693 786 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm24186-201ENSMUST00000157983 127 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm25861-201ENSMUST00000158251 109 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm25348-201ENSMUST00000158961 111 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm22420-201ENSMUST00000178795 126 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm19195-201ENSMUST00000222018 511 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trub1Q8C0D0 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms