Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm9332-201ENSMUST00000198431 730 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm43554-201ENSMUST00000199987 186 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm17850-201ENSMUST00000210023 1154 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 AC159242.1-201ENSMUST00000225832 194 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm5321-201ENSMUST00000072050 447 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm42923-201ENSMUST00000198438 2896 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp40Q8BWR4 AC154734.1-201ENSMUST00000219957 2141 ntBASIC7.87□□□□□ -1.15
Usp40Q8BWR4 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 CT025686.2-201ENSMUST00000227898 3315 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm37342-201ENSMUST00000194588 4965 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 AC130827.1-201ENSMUST00000220476 3850 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm22499-201ENSMUST00000104501 135 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Mir1188-201ENSMUST00000116756 120 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm12074-201ENSMUST00000120189 219 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm11389-201ENSMUST00000121407 430 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm14848-201ENSMUST00000121850 467 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm16456-201ENSMUST00000174431 920 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Mir3080-201ENSMUST00000175010 79 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm4617-201ENSMUST00000178993 331 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Mir6539-201ENSMUST00000183732 110 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Igkv4-56-201ENSMUST00000198436 349 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm43436-201ENSMUST00000199308 147 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm4374-201ENSMUST00000204929 424 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm44539-201ENSMUST00000206010 238 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 AL929265.1-201ENSMUST00000213427 125 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 AC118230.1-201ENSMUST00000220196 656 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Mir188-201ENSMUST00000083464 68 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Gm5715-201ENSMUST00000196854 1465 ntBASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp40Q8BWR4 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm16205-201ENSMUST00000117720 1027 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm12267-201ENSMUST00000121609 761 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm15274-201ENSMUST00000131442 291 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm21979-201ENSMUST00000139887 291 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm15259-201ENSMUST00000151262 291 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Mir1945-201ENSMUST00000157919 78 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm17121-201ENSMUST00000170414 847 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm17222-201ENSMUST00000180135 847 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm17771-201ENSMUST00000194477 1147 ntBASIC7.85□□□□□ -1.15
Usp40Q8BWR4 Gm29736-201ENSMUST00000198189 385 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms