Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm27985-201ENSMUST00000185112 378 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm37444-201ENSMUST00000193605 439 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm29755-201ENSMUST00000196976 948 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm45359-201ENSMUST00000210635 427 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup54Q8BTS4 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm24230-201ENSMUST00000104313 129 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm15152-201ENSMUST00000121540 394 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Scarna10-201ENSMUST00000158992 325 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm2959-201ENSMUST00000169844 621 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm8941-201ENSMUST00000181451 899 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm2914-201ENSMUST00000186120 328 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm29159-201ENSMUST00000187969 379 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm29284-201ENSMUST00000188363 255 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm9332-201ENSMUST00000198431 730 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm45700-201ENSMUST00000205866 347 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm5418-201ENSMUST00000206932 528 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm45777-201ENSMUST00000213009 301 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm26063-201ENSMUST00000083378 107 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm26163-201ENSMUST00000083792 178 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup54Q8BTS4 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.61□□□□□ -1.51
Nup54Q8BTS4 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm11481-201ENSMUST00000120069 255 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm12074-201ENSMUST00000120189 219 ntBASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.6□□□□□ -1.51
Nup54Q8BTS4 Gm17223-201ENSMUST00000171413 481 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms