Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc40Q8BI79 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.84□□□□□ -1.48
Ccdc40Q8BI79 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc40Q8BI79 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.84□□□□□ -1.48
Ccdc40Q8BI79 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc40Q8BI79 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc40Q8BI79 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm11270-201ENSMUST00000117685 471 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm14831-201ENSMUST00000120253 409 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm12732-201ENSMUST00000121688 180 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm12833-201ENSMUST00000136112 477 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm25439-201ENSMUST00000158280 131 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm22655-201ENSMUST00000174949 96 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Mir5125-201ENSMUST00000175240 79 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm44239-201ENSMUST00000204228 271 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm45596-201ENSMUST00000209279 434 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm8137-201ENSMUST00000218997 463 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm24919-201ENSMUST00000083020 106 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.83□□□□□ -1.48
Ccdc40Q8BI79 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm16394-201ENSMUST00000117289 675 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm11561-201ENSMUST00000117429 417 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm13428-201ENSMUST00000117540 365 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm11902-201ENSMUST00000118849 270 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm14237-201ENSMUST00000122080 430 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm23115-201ENSMUST00000158480 108 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm24303-201ENSMUST00000178237 126 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm18728-201ENSMUST00000186155 753 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm37700-201ENSMUST00000192617 965 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm38040-201ENSMUST00000193505 225 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm17952-201ENSMUST00000193914 747 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms