Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx55Q6ZPL9 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx55Q6ZPL9 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx55Q6ZPL9 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ddx55Q6ZPL9 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx55Q6ZPL9 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Ddx55Q6ZPL9 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx55Q6ZPL9 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ddx55Q6ZPL9 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm24340-201ENSMUST00000104208 97 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm6134-201ENSMUST00000117265 171 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm12656-201ENSMUST00000118149 577 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Klra14-ps-201ENSMUST00000119532 802 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm23965-201ENSMUST00000157969 142 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm22312-201ENSMUST00000158005 130 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm24860-201ENSMUST00000158457 276 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm23819-201ENSMUST00000158744 109 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm28466-201ENSMUST00000190678 659 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Trbv28-201ENSMUST00000192804 264 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm43655-201ENSMUST00000197367 222 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm44225-201ENSMUST00000203582 186 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm4548-201ENSMUST00000208487 509 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm45269-201ENSMUST00000210359 282 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm2961-201ENSMUST00000211074 772 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx55Q6ZPL9 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm12988-201ENSMUST00000119054 478 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm12267-201ENSMUST00000121609 761 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm22698-201ENSMUST00000175375 108 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm22569-201ENSMUST00000175545 124 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm28871-201ENSMUST00000186191 687 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm28604-201ENSMUST00000186629 484 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm28566-201ENSMUST00000186714 484 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm18342-201ENSMUST00000186987 694 ntBASIC6.63□□□□□ -1.35
Ddx55Q6ZPL9 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms