Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Usp49Q6P9L4 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm15161-201ENSMUST00000117340 387 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm13890-201ENSMUST00000117578 390 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm11908-201ENSMUST00000117755 347 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm13013-201ENSMUST00000119087 523 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm4910-201ENSMUST00000119605 366 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm23883-201ENSMUST00000122686 290 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm29474-201ENSMUST00000187688 379 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm6366-201ENSMUST00000198766 826 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm7890-201ENSMUST00000204877 601 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm45525-201ENSMUST00000210800 389 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm20946-201ENSMUST00000212367 461 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm10709-201ENSMUST00000213318 480 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp49Q6P9L4 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm11699-201ENSMUST00000119016 401 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm15754-201ENSMUST00000119191 478 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm11349-201ENSMUST00000122209 1116 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm43078-201ENSMUST00000197222 168 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm18747-201ENSMUST00000198129 648 ntBASIC6.22□□□□□ -1.41
Usp49Q6P9L4 Gm42652-201ENSMUST00000199073 614 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms