Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm27295-201ENSMUST00000184264 153 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm27601-201ENSMUST00000184794 127 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm42443-201ENSMUST00000198084 1155 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm46203-201ENSMUST00000218130 478 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim41Q5NCC3 Gm37274-201ENSMUST00000192167 1682 ntBASIC11.91□□□□□ -0.5
Trim41Q5NCC3 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm37553-201ENSMUST00000194135 1602 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Snora35-201ENSMUST00000104579 128 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm12842-201ENSMUST00000117298 476 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm12447-201ENSMUST00000119110 470 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm13555-201ENSMUST00000121668 319 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm23028-201ENSMUST00000158773 265 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm26570-201ENSMUST00000180672 342 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 AC091783.3-201ENSMUST00000223969 681 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 AC159205.4-201ENSMUST00000225964 704 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm25587-201ENSMUST00000082498 166 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm24043-201ENSMUST00000083108 116 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm6558-201ENSMUST00000191934 1973 ntBASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim41Q5NCC3 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Trim41Q5NCC3 Gm19335-201ENSMUST00000195836 2069 ntBASIC11.9□□□□□ -0.51
Trim41Q5NCC3 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim41Q5NCC3 Gm44224-201ENSMUST00000204131 1463 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm38062-201ENSMUST00000192541 1856 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm24790-201ENSMUST00000104285 132 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm7071-201ENSMUST00000120458 462 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm12880-201ENSMUST00000120652 494 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm15750-201ENSMUST00000120970 616 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm13007-201ENSMUST00000121866 365 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm25806-201ENSMUST00000122782 122 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm26271-201ENSMUST00000158349 104 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm24363-201ENSMUST00000158440 311 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm20648-201ENSMUST00000175815 328 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm5334-201ENSMUST00000187472 720 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm44818-201ENSMUST00000206608 358 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm45312-201ENSMUST00000210566 311 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm18903-201ENSMUST00000215343 480 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 AC124524.2-201ENSMUST00000223940 588 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 AC152394.1-201ENSMUST00000227360 1086 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm43335-201ENSMUST00000198299 3276 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 AC120375.2-201ENSMUST00000226532 1853 ntBASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim41Q5NCC3 Gm44898-201ENSMUST00000205934 2223 ntBASIC11.88□□□□□ -0.51
Trim41Q5NCC3 AC158388.2-201ENSMUST00000223665 1314 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms