Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.96□□□□□ -1.29
Msh6P54276 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Msh6P54276 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.96□□□□□ -1.29
Msh6P54276 Gm15786-201ENSMUST00000121079 450 ntBASIC6.96□□□□□ -1.29
Msh6P54276 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.96□□□□□ -1.29
Msh6P54276 Gm26310-201ENSMUST00000157766 117 ntBASIC6.96□□□□□ -1.29
Msh6P54276 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Msh6P54276 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Msh6P54276 Gm42452-201ENSMUST00000199749 617 ntBASIC6.96□□□□□ -1.29
Msh6P54276 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.96□□□□□ -1.29
Msh6P54276 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.96□□□□□ -1.29
Msh6P54276 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.96□□□□□ -1.29
Msh6P54276 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Msh6P54276 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.96□□□□□ -1.29
Msh6P54276 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.96□□□□□ -1.29
Msh6P54276 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Msh6P54276 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.96□□□□□ -1.29
Msh6P54276 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.96□□□□□ -1.29
Msh6P54276 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.96□□□□□ -1.29
Msh6P54276 Mir17-201ENSMUST00000083574 84 ntBASIC6.96□□□□□ -1.29
Msh6P54276 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Msh6P54276 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Msh6P54276 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.96□□□□□ -1.29
Msh6P54276 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.29
Msh6P54276 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Msh6P54276 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Msh6P54276 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msh6P54276 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msh6P54276 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.96□□□□□ -1.3
Msh6P54276 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.96□□□□□ -1.3
Msh6P54276 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.96□□□□□ -1.3
Msh6P54276 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.96□□□□□ -1.3
Msh6P54276 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Msh6P54276 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msh6P54276 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.96□□□□□ -1.3
Msh6P54276 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Msh6P54276 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msh6P54276 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Msh6P54276 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msh6P54276 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msh6P54276 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msh6P54276 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msh6P54276 Gm23327-201ENSMUST00000157420 78 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm8256-201ENSMUST00000169178 453 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.95□□□□□ -1.3
Msh6P54276 Gm37882-201ENSMUST00000195254 196 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm44259-201ENSMUST00000204996 298 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm45215-201ENSMUST00000206407 395 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.95□□□□□ -1.3
Msh6P54276 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.95□□□□□ -1.3
Msh6P54276 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.95□□□□□ -1.3
Msh6P54276 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.95□□□□□ -1.3
Msh6P54276 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Msh6P54276 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Msh6P54276 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Gm16128-201ENSMUST00000117855 626 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm15971-201ENSMUST00000119372 211 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.95□□□□□ -1.3
Msh6P54276 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm7316-201ENSMUST00000165395 445 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm17223-201ENSMUST00000171413 481 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm22411-201ENSMUST00000175462 126 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm22002-201ENSMUST00000175622 125 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Gm28567-201ENSMUST00000190270 693 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm37044-201ENSMUST00000193531 693 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.95□□□□□ -1.3
Msh6P54276 Gm38369-201ENSMUST00000195101 693 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Gm44776-201ENSMUST00000207212 381 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.95□□□□□ -1.3
Msh6P54276 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.95□□□□□ -1.3
Msh6P54276 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh6P54276 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Msh6P54276 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.95□□□□□ -1.3
Msh6P54276 Gm26814-201ENSMUST00000181178 4149 ntBASIC6.94□□□□□ -1.3
Msh6P54276 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms