Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Cux1P53564 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 Gm26950-201ENSMUST00000182734 498 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Gm27528-201ENSMUST00000183544 205 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Gm21654-201ENSMUST00000188086 691 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Gm37503-201ENSMUST00000192088 319 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Gm20203-201ENSMUST00000192352 332 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Gm38185-201ENSMUST00000193195 694 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Cux1P53564 Gm29785-201ENSMUST00000217033 383 ntBASIC8.26□□□□□ -1.09
Cux1P53564 AC131117.2-203ENSMUST00000225886 950 ntBASIC8.26□□□□□ -1.09
Cux1P53564 AC125539.2-202ENSMUST00000227983 587 ntBASIC8.26□□□□□ -1.09
Cux1P53564 AC125539.2-201ENSMUST00000228339 753 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Cux1P53564 Gm23796-201ENSMUST00000084011 160 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Cux1P53564 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Cux1P53564 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 Gm18163-201ENSMUST00000197877 1643 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
Cux1P53564 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Cux1P53564 AC124183.1-201ENSMUST00000222367 2135 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Cux1P53564 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Cux1P53564 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Cux1P53564 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC8.25□□□□□ -1.09
Cux1P53564 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC8.25□□□□□ -1.09
Cux1P53564 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.25□□□□□ -1.09
Cux1P53564 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Gm12854-201ENSMUST00000128518 297 ntBASIC8.25□□□□□ -1.09
Cux1P53564 Gm16254-201ENSMUST00000131528 730 ntBASIC8.25□□□□□ -1.09
Cux1P53564 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Gm21909-201ENSMUST00000178260 439 ntBASIC8.25□□□□□ -1.09
Cux1P53564 Gm28097-201ENSMUST00000187333 366 ntBASIC8.25□□□□□ -1.09
Cux1P53564 Gm42461-201ENSMUST00000198627 1150 ntBASIC8.25□□□□□ -1.09
Cux1P53564 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
Cux1P53564 Gm43919-201ENSMUST00000204303 364 ntBASIC8.25□□□□□ -1.09
Cux1P53564 AC121986.1-201ENSMUST00000218588 781 ntBASIC8.25□□□□□ -1.09
Cux1P53564 AC154851.1-201ENSMUST00000221591 655 ntBASIC8.25□□□□□ -1.09
Cux1P53564 AC125543.1-201ENSMUST00000222778 101 ntBASIC8.25□□□□□ -1.09
Cux1P53564 AC154657.1-201ENSMUST00000226394 775 ntBASIC8.25□□□□□ -1.09
Cux1P53564 Gm7665-201ENSMUST00000076710 297 ntBASIC8.25□□□□□ -1.09
Cux1P53564 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Cux1P53564 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Cux1P53564 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.25□□□□□ -1.09
Cux1P53564 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.25□□□□□ -1.09
Cux1P53564 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Cux1P53564 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Cux1P53564 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Cux1P53564 Gm23593-201ENSMUST00000104309 120 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Cux1P53564 Gm9085-201ENSMUST00000119994 1072 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Gm11278-201ENSMUST00000121002 997 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Gm26098-201ENSMUST00000157247 288 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC8.24□□□□□ -1.09
Cux1P53564 Gm26925-201ENSMUST00000182470 957 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC8.24□□□□□ -1.09
Cux1P53564 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC8.24□□□□□ -1.09
Cux1P53564 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC8.24□□□□□ -1.09
Cux1P53564 AC154239.1-201ENSMUST00000228565 406 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Cux1P53564 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Cux1P53564 Mir27a-201ENSMUST00000083510 87 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Gm24763-201ENSMUST00000083688 190 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Cux1P53564 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Cux1P53564 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Cux1P53564 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Cux1P53564 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Cux1P53564 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Cux1P53564 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Cux1P53564 Gm37834-201ENSMUST00000194517 3035 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Gm43469-201ENSMUST00000196084 4634 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Cux1P53564 Gm13679-201ENSMUST00000118678 484 ntBASIC8.24□□□□□ -1.09
Cux1P53564 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Cux1P53564 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Cux1P53564 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Cux1P53564 Gm3531-201ENSMUST00000162698 489 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms