Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Brca1P48754 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Brca1P48754 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm14172-201ENSMUST00000118255 644 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm11625-201ENSMUST00000119535 296 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm3362-201ENSMUST00000148102 466 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.11□□□□□ -1.43
Brca1P48754 Gm23023-201ENSMUST00000158767 109 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm25348-201ENSMUST00000158961 111 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.11□□□□□ -1.43
Brca1P48754 Gm27690-201ENSMUST00000184596 126 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm4854-201ENSMUST00000185902 574 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Brca1P48754 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.11□□□□□ -1.43
Brca1P48754 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.11□□□□□ -1.43
Brca1P48754 BX530055.1-201ENSMUST00000197285 122 ntBASIC6.11□□□□□ -1.43
Brca1P48754 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm18329-201ENSMUST00000215832 589 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm8264-201ENSMUST00000217801 465 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm8158-201ENSMUST00000219220 465 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm8112-201ENSMUST00000219637 465 ntBASIC6.11□□□□□ -1.43
Brca1P48754 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.11□□□□□ -1.43
Brca1P48754 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Brca1P48754 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Brca1P48754 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.11□□□□□ -1.43
Brca1P48754 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Brca1P48754 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Brca1P48754 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm12110-201ENSMUST00000121601 579 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm22367-201ENSMUST00000178930 132 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm26925-201ENSMUST00000182470 957 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm28503-201ENSMUST00000185966 147 ntBASIC6.11□□□□□ -1.43
Brca1P48754 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Gm29489-201ENSMUST00000188934 324 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brca1P48754 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.11□□□□□ -1.43
Brca1P48754 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Brca1P48754 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Brca1P48754 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.1□□□□□ -1.43
Brca1P48754 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.1□□□□□ -1.43
Brca1P48754 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Brca1P48754 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.1□□□□□ -1.43
Brca1P48754 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC6.1□□□□□ -1.43
Brca1P48754 Gm22020-201ENSMUST00000104358 136 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Gm14995-201ENSMUST00000117135 391 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Gm16149-201ENSMUST00000117631 309 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Gm7206-201ENSMUST00000117730 508 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Gm2622-201ENSMUST00000200018 471 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC6.1□□□□□ -1.43
Brca1P48754 Gm46327-201ENSMUST00000218240 365 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC6.1□□□□□ -1.43
Brca1P48754 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Brca1P48754 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Brca1P48754 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Brca1P48754 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Brca1P48754 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Brca1P48754 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.1□□□□□ -1.43
Brca1P48754 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.09□□□□□ -1.43
Brca1P48754 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Brca1P48754 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Brca1P48754 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brca1P48754 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Brca1P48754 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Brca1P48754 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.09□□□□□ -1.43
Brca1P48754 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.09□□□□□ -1.43
Brca1P48754 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.09□□□□□ -1.43
Brca1P48754 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.09□□□□□ -1.43
Brca1P48754 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.09□□□□□ -1.43
Brca1P48754 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.09□□□□□ -1.43
Brca1P48754 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.09□□□□□ -1.43
Brca1P48754 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms