Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm14667-201ENSMUST00000119448 1350 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm25595-201ENSMUST00000102273 97 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm6175-201ENSMUST00000121351 400 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC4.93□□□□□ -1.62
Rfx3P48381 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm24239-201ENSMUST00000157791 255 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm23964-201ENSMUST00000157966 107 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm16139-201ENSMUST00000160015 420 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm6872-201ENSMUST00000165001 700 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm21999-201ENSMUST00000165985 387 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm17046-201ENSMUST00000168078 850 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm27679-201ENSMUST00000184612 84 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Rfx3P48381 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm38131-201ENSMUST00000192449 430 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm18865-201ENSMUST00000193011 1171 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Mir6906-201ENSMUST00000198998 58 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC4.93□□□□□ -1.62
Rfx3P48381 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Rfx3P48381 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.93□□□□□ -1.62
Rfx3P48381 AC117797.1-201ENSMUST00000223977 695 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Rfx3P48381 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Rfx3P48381 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Mir298-201ENSMUST00000083476 82 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Rfx3P48381 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Rfx3P48381 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.93□□□□□ -1.62
Rfx3P48381 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Rfx3P48381 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.93□□□□□ -1.62
Rfx3P48381 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rfx3P48381 Gm37092-201ENSMUST00000193381 1518 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.92□□□□□ -1.62
Rfx3P48381 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Rfx3P48381 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.92□□□□□ -1.62
Rfx3P48381 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 Gm4853-201ENSMUST00000119359 394 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm14106-201ENSMUST00000119382 438 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.92□□□□□ -1.62
Rfx3P48381 Gm26169-201ENSMUST00000158420 135 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm16112-201ENSMUST00000159075 382 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm8185-201ENSMUST00000160999 669 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm18343-201ENSMUST00000172802 604 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.92□□□□□ -1.62
Rfx3P48381 Gm44360-201ENSMUST00000200081 82 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.92□□□□□ -1.62
Rfx3P48381 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.92□□□□□ -1.62
Rfx3P48381 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.92□□□□□ -1.62
Rfx3P48381 AC127242.4-201ENSMUST00000221242 470 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm4012-201ENSMUST00000221504 581 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.92□□□□□ -1.62
Rfx3P48381 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Rfx3P48381 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rfx3P48381 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms