Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P20040 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC4.87□□□□□ -1.63
P20040 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.87□□□□□ -1.63
P20040 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.87□□□□□ -1.63
P20040 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
P20040 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
P20040 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.87□□□□□ -1.63
P20040 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
P20040 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.86□□□□□ -1.63
P20040 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
P20040 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
P20040 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.86□□□□□ -1.63
P20040 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Gm37959-201ENSMUST00000191700 2897 ntBASIC4.86□□□□□ -1.63
P20040 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.86□□□□□ -1.63
P20040 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC4.86□□□□□ -1.63
P20040 Mup-ps16-201ENSMUST00000120085 596 ntBASIC4.86□□□□□ -1.63
P20040 Gm12482-201ENSMUST00000120435 630 ntBASIC4.86□□□□□ -1.63
P20040 Gm22959-201ENSMUST00000122514 303 ntBASIC4.86□□□□□ -1.63
P20040 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC4.86□□□□□ -1.63
P20040 Gm25846-201ENSMUST00000158013 135 ntBASIC4.86□□□□□ -1.63
P20040 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Gm18343-201ENSMUST00000172802 604 ntBASIC4.86□□□□□ -1.63
P20040 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Mir3572-201ENSMUST00000175549 86 ntBASIC4.86□□□□□ -1.63
P20040 Mir6412-201ENSMUST00000184477 97 ntBASIC4.86□□□□□ -1.63
P20040 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC4.86□□□□□ -1.63
P20040 Gm8826-201ENSMUST00000193161 948 ntBASIC4.86□□□□□ -1.63
P20040 Gm37187-201ENSMUST00000193425 341 ntBASIC4.86□□□□□ -1.63
P20040 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.86□□□□□ -1.63
P20040 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC4.86□□□□□ -1.63
P20040 Gm6520-201ENSMUST00000200636 410 ntBASIC4.86□□□□□ -1.63
P20040 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC4.86□□□□□ -1.63
P20040 Gm43456-201ENSMUST00000202519 457 ntBASIC4.86□□□□□ -1.63
P20040 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.86□□□□□ -1.63
P20040 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.86□□□□□ -1.63
P20040 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.86□□□□□ -1.63
P20040 AC117797.1-201ENSMUST00000223977 695 ntBASIC4.86□□□□□ -1.63
P20040 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.86□□□□□ -1.63
P20040 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.86□□□□□ -1.63
P20040 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC4.86□□□□□ -1.63
P20040 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.86□□□□□ -1.63
P20040 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
P20040 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
P20040 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.85□□□□□ -1.63
P20040 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
P20040 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.85□□□□□ -1.63
P20040 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
P20040 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Gm37482-201ENSMUST00000194899 2791 ntBASIC4.85□□□□□ -1.63
P20040 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
P20040 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
P20040 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
P20040 Gm25595-201ENSMUST00000102273 97 ntBASIC4.85□□□□□ -1.63
P20040 Gm22370-201ENSMUST00000102422 83 ntBASIC4.85□□□□□ -1.63
P20040 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
P20040 Gm15421-202ENSMUST00000118224 399 ntBASIC4.85□□□□□ -1.63
P20040 Gm14610-201ENSMUST00000118358 966 ntBASIC4.85□□□□□ -1.63
P20040 Gm12768-201ENSMUST00000120055 759 ntBASIC4.85□□□□□ -1.63
P20040 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC4.85□□□□□ -1.63
P20040 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.85□□□□□ -1.63
P20040 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Gm23669-201ENSMUST00000157470 128 ntBASIC4.85□□□□□ -1.63
P20040 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.85□□□□□ -1.63
P20040 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Gm2877-201ENSMUST00000178248 1204 ntBASIC4.85□□□□□ -1.63
P20040 Gm8324-201ENSMUST00000178911 1204 ntBASIC4.85□□□□□ -1.63
P20040 Gm37024-201ENSMUST00000192224 868 ntBASIC4.85□□□□□ -1.63
P20040 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms