Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm24454-201ENSMUST00000083349 132 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Mir99a-201ENSMUST00000083596 65 ntBASIC5.63□□□□□ -1.51
Lire1P11260 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Lire1P11260 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lire1P11260 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.63□□□□□ -1.51
Lire1P11260 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.63□□□□□ -1.51
Lire1P11260 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Lire1P11260 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
Lire1P11260 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Mir147-201ENSMUST00000102354 79 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm15332-201ENSMUST00000118386 357 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm14805-201ENSMUST00000120172 340 ntBASIC5.62□□□□□ -1.51
Lire1P11260 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.62□□□□□ -1.51
Lire1P11260 Snora47-201ENSMUST00000157483 138 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm22094-201ENSMUST00000158976 117 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm3030-201ENSMUST00000163410 516 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm3339-201ENSMUST00000163462 475 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm23632-201ENSMUST00000175289 125 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm26923-201ENSMUST00000182615 996 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm8581-201ENSMUST00000188636 890 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm29592-201ENSMUST00000189434 370 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm37490-201ENSMUST00000195566 724 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Gm33178-201ENSMUST00000212090 257 ntBASIC5.62□□□□□ -1.51
Lire1P11260 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.62□□□□□ -1.51
Lire1P11260 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.62□□□□□ -1.51
Lire1P11260 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.62□□□□□ -1.51
Lire1P11260 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm9788-201ENSMUST00000057038 906 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.62□□□□□ -1.51
Lire1P11260 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Lire1P11260 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.62□□□□□ -1.51
Lire1P11260 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lire1P11260 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.62□□□□□ -1.51
Lire1P11260 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Gm22103-201ENSMUST00000116733 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm26475-201ENSMUST00000116769 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm23620-201ENSMUST00000116812 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm25042-201ENSMUST00000116856 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm25540-201ENSMUST00000116880 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Gm23030-201ENSMUST00000158004 273 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm26037-201ENSMUST00000158150 311 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm26167-201ENSMUST00000158423 253 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lire1P11260 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.61□□□□□ -1.51
Lire1P11260 Gm22548-201ENSMUST00000174899 78 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Mir5107-201ENSMUST00000175586 88 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Gm23550-201ENSMUST00000179003 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm25123-201ENSMUST00000179154 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lire1P11260 Gm25353-201ENSMUST00000179366 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm22992-201ENSMUST00000179496 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm25892-201ENSMUST00000179867 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm24092-201ENSMUST00000180257 121 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm19427-201ENSMUST00000183619 208 ntBASIC5.61□□□□□ -1.51
Lire1P11260 Gm27853-201ENSMUST00000184176 250 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms