Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm16007-201ENSMUST00000117837 286 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm2199-201ENSMUST00000119065 874 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm15801-201ENSMUST00000120920 522 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm11609-201ENSMUST00000121926 793 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm12438-201ENSMUST00000122034 336 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Mir1953-201ENSMUST00000157866 89 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm26401-201ENSMUST00000158502 76 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm8783-201ENSMUST00000159764 522 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm37543-201ENSMUST00000192443 1031 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm9931-201ENSMUST00000193584 1185 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm37774-201ENSMUST00000194401 245 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm38360-201ENSMUST00000195130 454 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm42776-201ENSMUST00000198031 406 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm6064-201ENSMUST00000203999 454 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 AC108945.1-201ENSMUST00000226477 94 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm6369-201ENSMUST00000069626 412 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm5582-201ENSMUST00000075251 522 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm23927-201ENSMUST00000082466 215 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
H2afb3S4R1G7 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.29□□□□□ -1.56
H2afb3S4R1G7 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm25313-201ENSMUST00000101817 116 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Mir546-201ENSMUST00000102105 121 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm13998-201ENSMUST00000120952 335 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm11797-201ENSMUST00000121336 754 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm23587-201ENSMUST00000157658 84 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm16026-202ENSMUST00000159695 772 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm15508-201ENSMUST00000160330 325 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm8550-201ENSMUST00000161621 653 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm20453-201ENSMUST00000173968 226 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm24754-201ENSMUST00000177997 107 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm23287-201ENSMUST00000179427 116 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm23143-201ENSMUST00000180137 116 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm37438-201ENSMUST00000192813 393 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm37784-201ENSMUST00000193233 189 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.28□□□□□ -1.56
H2afb3S4R1G7 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 129.5 ms