Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm12482-201ENSMUST00000120435 630 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm15194-201ENSMUST00000120453 434 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm11200-201ENSMUST00000121698 448 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm22959-201ENSMUST00000122514 303 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm23958-201ENSMUST00000157207 105 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm24395-201ENSMUST00000158139 125 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm9006-201ENSMUST00000165520 841 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Mir3097-201ENSMUST00000175356 67 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm27854-201ENSMUST00000175578 244 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm1972-201ENSMUST00000181606 964 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm29664-201ENSMUST00000191125 463 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Mir6906-201ENSMUST00000198998 58 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm44277-201ENSMUST00000205128 649 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm5418-201ENSMUST00000206932 528 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm45845-201ENSMUST00000207326 582 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm17988-201ENSMUST00000208796 535 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Trim3Q9R1R2 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.24□□□□□ -1.57
Trim3Q9R1R2 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm26300-201ENSMUST00000102282 94 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm14610-201ENSMUST00000118358 966 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm11447-201ENSMUST00000118983 858 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm14791-201ENSMUST00000119061 1166 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm23115-201ENSMUST00000158480 108 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm18343-201ENSMUST00000172802 604 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm6223-201ENSMUST00000178436 871 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm27030-201ENSMUST00000182551 464 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm37024-201ENSMUST00000192224 868 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm42428-201ENSMUST00000198677 302 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm34149-201ENSMUST00000203547 304 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm5735-201ENSMUST00000207053 167 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm7887-201ENSMUST00000056948 537 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.23□□□□□ -1.57
Trim3Q9R1R2 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms