Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm11561-201ENSMUST00000117429 417 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm11270-201ENSMUST00000117685 471 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm12850-201ENSMUST00000119210 436 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm12813-201ENSMUST00000119615 902 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm14065-201ENSMUST00000120848 585 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm6175-201ENSMUST00000121351 400 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm12732-201ENSMUST00000121688 180 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm13214-201ENSMUST00000122137 408 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm24363-201ENSMUST00000158440 311 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm29284-201ENSMUST00000188363 255 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm38040-201ENSMUST00000193505 225 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm44319-201ENSMUST00000196974 93 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm7733-201ENSMUST00000199038 919 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm18205-201ENSMUST00000209215 841 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm19186-201ENSMUST00000219922 333 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Olfr192-201ENSMUST00000080251 925 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm23795-201ENSMUST00000084006 137 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm6427-201ENSMUST00000118721 979 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm13866-201ENSMUST00000118901 968 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm5405-201ENSMUST00000120478 609 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm13533-201ENSMUST00000121104 177 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm7309-201ENSMUST00000121670 581 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm25025-201ENSMUST00000175018 111 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm17952-201ENSMUST00000193914 747 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm43054-201ENSMUST00000199495 884 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm44795-201ENSMUST00000205496 319 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm44582-201ENSMUST00000209125 445 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm5087-204ENSMUST00000225820 645 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Mir337-201ENSMUST00000083592 97 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm25682-201ENSMUST00000083942 164 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdc40Q9DC48 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms